STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBT65705.1Cysteine synthase A. (368 aa)    
Predicted Functional Partners:
SBT65703.1
Biotin carboxylase.
  0.904
SBT68287.1
Cystathionine gamma-lyase.
 
 0.864
SBT68700.1
Cystathionine gamma-lyase.
 
 0.864
SBT67726.1
Methionine-gamma-lyase.
 
 0.850
SBT64580.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.846
SBT65704.1
Argininosuccinate lyase.
 
   
 0.837
SBT65400.1
Cystathionine gamma-synthase.
 
 0.824
SBT66992.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.814
SBT67920.1
Glycosyltransferase, GT2 family.
  
 0.807
SBT65702.1
Taurine catabolism dioxygenase TauD, TfdA family.
       0.793
Your Current Organism:
Micromonospora sediminicola
NCBI taxonomy Id: 946078
Other names: BCC 45601, DSM 45794, M. sediminicola, Micromonospora sediminicola Supong et al. 2013, Micromonospora sp. SH2-13, NBRC 107934, strain SH2-13
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