STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBT66309.1phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (435 aa)    
Predicted Functional Partners:
SBT66310.1
acyl-CoA thioesterase.
 
 
 0.985
SBT63146.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 
 0.889
SBT63147.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
 0.882
SBT63145.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 
 0.879
SBT63144.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
  
 0.823
SBT69280.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
  
 0.823
SBT67721.1
Amino acid adenylation domain-containing protein.
     
 0.814
SBT63143.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.792
SBT69279.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.792
SBT67722.1
Amino acid adenylation domain-containing protein.
     
 0.769
Your Current Organism:
Micromonospora sediminicola
NCBI taxonomy Id: 946078
Other names: BCC 45601, DSM 45794, M. sediminicola, Micromonospora sediminicola Supong et al. 2013, Micromonospora sp. SH2-13, NBRC 107934, strain SH2-13
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