STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BUE80_DR000943Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
BUE80_DR006231
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.623
BUE80_DR001011
Glutamate synthase (NADPH).
    
 0.622
BUE80_DR009025
Ribosomal RNA-processing protein 15.
    
 0.570
BUE80_DR005960
Ribosomal RNA-processing protein 15.
    
 0.570
BUE80_DR006874
Electron transfer flavoprotein domain-containing protein.
   
 
 0.562
BUE80_DR004315
Electron transfer flavoprotein domain-containing protein.
   
 
 0.562
BUE80_DR008207
Thioredoxin reductase.
  
 
 0.547
BUE80_DR006685
Thioredoxin reductase.
  
 
 0.547
BUE80_DR008059
Phenylalanine ammonia-lyase.
   
 
 0.521
BUE80_DR000178
Phenylalanine ammonia-lyase.
   
 
 0.521
Your Current Organism:
Diplocarpon rosae
NCBI taxonomy Id: 946125
Other names: D. rosae
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