STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet0156Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. (281 aa)    
Predicted Functional Partners:
Bpet0155
Alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
areB
Aryl-alcohol dehydrogenase.
 
 0.916
fdsG
NAD-dependent formate dehydrogenase gamma subunit.
    
 0.916
fdsD
NAD-dependent formate dehydrogenase delta subunit.
    
  0.906
fdsA
NAD-dependent formate dehydrogenase alpha subunit.
    
  0.905
fdhA
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.905
fdsB
NAD-dependent formate dehydrogenase beta subunit.
    
  0.903
fdhC
Formate dehydrogenase subunit C precursor.
     
  0.900
fdhB
Formate dehydrogenase, iron-sulfur subunit.
     
  0.900
Bpet3637
Putative membrane protein.
  
 
 0.811
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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