STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet0502Putative extracellular solute-binding protein. (338 aa)    
Predicted Functional Partners:
Bpet0503
Putative amino acid ABC transporter permease protein.
 
 
 0.994
Bpet0504
Putative amino acid ABC transporter permease protein.
 
 0.992
Bpet0505
Putative amino acid ABC transporter ATP-binding protein.
 
 0.989
Bpet4749
Putative extracellular solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.902
ftsE
Cell division ATP-binding protein.
     
 0.570
Bpet0500
Hypothetical protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.563
Bpet4443
Putative amino-acid ABC transporter ATP binding protein.
 
 
 0.520
Bpet4139
Putative ABC-type amino acid transporter, permease component.
 
 
 0.494
Bpet4138
Putative amino acids ABC transporter ATP-binding protein.
 
 
 0.483
Bpet3495
Putative amino acid ABC transporter ATP-binding protein.
 
 
 0.473
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.