STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet0535HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (416 aa)    
Predicted Functional Partners:
Bpet0536
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.980
Bpet0537
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.980
Bpet0538
Putative outer membrane efflux protein.
 
 
 0.966
Bpet4509
AcrB/AcrD/AcrF family protein.
 
 
 0.820
pilD
Prepilin signal peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.808
Bpet3027
AcrB/AcrD/AcrF family protein.
 
 
 0.803
Bpet3261
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.803
Bpet4188
AcrB/AcrD/AcrF family protein.
 
 
 0.802
mexD
Putative efflux system transmembrane protein.
 
 
 0.801
Bpet3262
AcrB/AcrD/AcrF family protein.
 
 
 0.796
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.