STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet0563Putative secreted acyltransferase. (229 aa)    
Predicted Functional Partners:
plsY
Putative membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
 
 0.927
Bpet3528
Conserved hypothetical protein; Putative hemolysin.
 
  
 0.918
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.916
dgkA
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
    
 0.909
plsC
Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.904
gpsA
Glycerol-3-phosphate dehydrogenase, NAD-dependent; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.833
glpA
GlpA protein; Glycerol-3-phosphate dehydrogenase.
  
 
 0.830
Bpet0562
Putative Hollyday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
  
 0.702
Bpet0561
UPF0301 protein Bpet0561; Unnamed protein product; Belongs to the UPF0301 (AlgH) family.
       0.649
wcbR
Putative polyketide synthase.
 
 
 0.632
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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