Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bpet1589 | Bpet1858 | Bpet1589 | Bpet1858 | Virulence protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.807 |
Bpet1589 | Bpet2638 | Bpet1589 | Bpet2638 | Virulence protein. | Transcriptional regulator, MerR-family. | 0.656 |
Bpet1589 | Bpet2745 | Bpet1589 | Bpet2745 | Virulence protein. | Putative lipoprotein. | 0.768 |
Bpet1589 | Bpet3179 | Bpet1589 | Bpet3179 | Virulence protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.495 |
Bpet1589 | Bpet3483 | Bpet1589 | Bpet3483 | Virulence protein. | Putative glycosyltransferase. | 0.606 |
Bpet1589 | Bpet4122 | Bpet1589 | Bpet4122 | Virulence protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.940 |
Bpet1589 | Bpet4722 | Bpet1589 | Bpet4722 | Virulence protein. | Bacterioferritin. | 0.775 |
Bpet1589 | Bpet4798 | Bpet1589 | Bpet4798 | Virulence protein. | Putative exported protein. | 0.679 |
Bpet1589 | osmB | Bpet1589 | Bpet0883 | Virulence protein. | Osmotically inducible lipoprotein B. | 0.774 |
Bpet1858 | Bpet1589 | Bpet1858 | Bpet1589 | Hypothetical protein predicted by Glimmer/Critica. | Virulence protein. | 0.807 |
Bpet1858 | Bpet2745 | Bpet1858 | Bpet2745 | Hypothetical protein predicted by Glimmer/Critica. | Putative lipoprotein. | 0.973 |
Bpet1858 | Bpet3483 | Bpet1858 | Bpet3483 | Hypothetical protein predicted by Glimmer/Critica. | Putative glycosyltransferase. | 0.710 |
Bpet1858 | Bpet4122 | Bpet1858 | Bpet4122 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein predicted by Glimmer/Critica. | 0.971 |
Bpet1858 | Bpet4722 | Bpet1858 | Bpet4722 | Hypothetical protein predicted by Glimmer/Critica. | Bacterioferritin. | 0.786 |
Bpet1858 | osmB | Bpet1858 | Bpet0883 | Hypothetical protein predicted by Glimmer/Critica. | Osmotically inducible lipoprotein B. | 0.712 |
Bpet2638 | Bpet1589 | Bpet2638 | Bpet1589 | Transcriptional regulator, MerR-family. | Virulence protein. | 0.656 |
Bpet2638 | Bpet4122 | Bpet2638 | Bpet4122 | Transcriptional regulator, MerR-family. | Hypothetical protein predicted by Glimmer/Critica. | 0.687 |
Bpet2638 | Bpet4722 | Bpet2638 | Bpet4722 | Transcriptional regulator, MerR-family. | Bacterioferritin. | 0.720 |
Bpet2638 | Bpet4798 | Bpet2638 | Bpet4798 | Transcriptional regulator, MerR-family. | Putative exported protein. | 0.730 |
Bpet2638 | osmB | Bpet2638 | Bpet0883 | Transcriptional regulator, MerR-family. | Osmotically inducible lipoprotein B. | 0.718 |
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