STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet1024LMWPc domain-containing protein; Unnamed protein product; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (165 aa)    
Predicted Functional Partners:
Bpet1023
Putative sodium bile acid symporter family protein.
 
  
 0.879
Bpet1026
Putative transcriptional regulator, ArsR-family.
 
  
 0.878
Bpet1025
Glyoxalase family protein.
  
 0.858
arsC1
Arsenate reductase.
 
  
 0.829
arsR
Putative transcriptional regulator.
 
  
 0.537
wcbR
Putative polyketide synthase.
  
 
 0.519
Bpet4551
Putative sodium bile acid symporter family protein.
 
  
 0.500
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.457
trxC
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.443
trxA
Thioredoxin.
  
 
 0.432
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.