STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet1069Conserved exported protein. (201 aa)    
Predicted Functional Partners:
Bpet1068
Conserved protein, putatively exported.
 
     0.946
Bpet1071
Putative membrane protein.
 
   
 0.945
Bpet1072
Putative membrane protein.
 
     0.945
Bpet1070
Putative exported protein.
 
     0.944
Bpet1066
Putative secreted protein.
 
     0.933
Bpet1081
Conserved hypothetical protein.
 
   
 0.858
Bpet1079
Putative exported protein.
 
     0.856
Bpet1078
Hypothetical protein; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
     0.847
Bpet1077
Conserved hypothetical protein.
 
     0.846
Bpet1080
Putative lipoprotein.
 
     0.841
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.