Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bpet0379 | Bpet1224 | Bpet0379 | Bpet1224 | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | Putative acyl dehydratase. | 0.797 |
Bpet0379 | Bpet1228 | Bpet0379 | Bpet1228 | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | Acyl dehydratase, MaoC family. | 0.440 |
Bpet0379 | Bpet1229 | Bpet0379 | Bpet1229 | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | Putative thiolase. | 0.874 |
Bpet1224 | Bpet0379 | Bpet1224 | Bpet0379 | Putative acyl dehydratase. | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | 0.797 |
Bpet1224 | Bpet1228 | Bpet1224 | Bpet1228 | Putative acyl dehydratase. | Acyl dehydratase, MaoC family. | 0.462 |
Bpet1224 | Bpet1229 | Bpet1224 | Bpet1229 | Putative acyl dehydratase. | Putative thiolase. | 0.786 |
Bpet1224 | Bpet1230 | Bpet1224 | Bpet1230 | Putative acyl dehydratase. | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | 0.827 |
Bpet1224 | Bpet1231 | Bpet1224 | Bpet1231 | Putative acyl dehydratase. | Hypothetical protein, probable enoyl-CoA hydratase/isomerase family member. | 0.634 |
Bpet1224 | Bpet1638 | Bpet1224 | Bpet1638 | Putative acyl dehydratase. | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | 0.795 |
Bpet1224 | bug30 | Bpet1224 | Bpet1226 | Putative acyl dehydratase. | Putative secreted protein. | 0.574 |
Bpet1224 | fadB1 | Bpet1224 | Bpet2962 | Putative acyl dehydratase. | Putative fatty oxidation complex alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.443 |
Bpet1224 | fadB1-2 | Bpet1224 | Bpet3413 | Putative acyl dehydratase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase. | 0.443 |
Bpet1224 | fadB2 | Bpet1224 | Bpet3411 | Putative acyl dehydratase. | enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase. | 0.443 |
Bpet1228 | Bpet0379 | Bpet1228 | Bpet0379 | Acyl dehydratase, MaoC family. | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | 0.440 |
Bpet1228 | Bpet1224 | Bpet1228 | Bpet1224 | Acyl dehydratase, MaoC family. | Putative acyl dehydratase. | 0.462 |
Bpet1228 | Bpet1229 | Bpet1228 | Bpet1229 | Acyl dehydratase, MaoC family. | Putative thiolase. | 0.828 |
Bpet1228 | Bpet1230 | Bpet1228 | Bpet1230 | Acyl dehydratase, MaoC family. | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | 0.795 |
Bpet1228 | Bpet1231 | Bpet1228 | Bpet1231 | Acyl dehydratase, MaoC family. | Hypothetical protein, probable enoyl-CoA hydratase/isomerase family member. | 0.724 |
Bpet1228 | Bpet1638 | Bpet1228 | Bpet1638 | Acyl dehydratase, MaoC family. | Conserved hypothetical protein; Predicted nucleic-acid-binding protein containing a Zn-ribbon. | 0.474 |
Bpet1228 | bug30 | Bpet1228 | Bpet1226 | Acyl dehydratase, MaoC family. | Putative secreted protein. | 0.452 |
page 1 of 4