STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet1289Putative transcriptional regulator (phage-related). (70 aa)    
Predicted Functional Partners:
intB13-4
Phage-related integrase; Belongs to the 'phage' integrase family.
 
  
 0.740
parA2
Conserved hypothetical protein; ATPases involved in chromosome partitioning.
 
     0.736
Bpet1292
Conserved hypothetical protein.
 
     0.735
intB13-2
Phage-related integrase; Belongs to the 'phage' integrase family.
 
  
 0.731
Bpet1293
Hypothetical protein.
 
     0.728
Bpet4545
Predicted transcriptional regulator.
  
     0.726
Bpet1291
Conserved hypothetical protein; Predicted transcriptional regulator.
 
     0.719
int3
Int3 protein; Integrase; Belongs to the 'phage' integrase family.
 
  
 0.718
Bpet3699
Phage-related integrase; Belongs to the 'phage' integrase family.
 
  
 0.701
Bpet4544
Phage-related integrase; Belongs to the 'phage' integrase family.
 
  
 0.701
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.