STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssb3Ssb3 protein; Single-stranded DNA-binding protein. (146 aa)    
Predicted Functional Partners:
topB3
DNA topoisomerase III.
 
 
 0.950
top3B
Pseudogene.
 
 
 0.926
topB4
DNA topoisomerase III.
 
 
 0.912
topB2
DNA topoisomerase III.
 
 
 0.911
Bpet1445
Conserved hypothetical protein.
 
     0.900
Bpet1442
Conserved hypothetical protein.
 
   
 0.846
Bpet1443
Conserved hypothetical protein.
 
     0.842
Bpet1444
Conserved hypothetical protein.
 
     0.842
parA3
Hypothetical protein; ATPases involved in chromosome partitioning.
 
     0.812
Bpet1031
Conserved hypothetical protein.
 
   
 0.789
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.