STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet1530ISSod11, transposase. (223 aa)    
Predicted Functional Partners:
Bpet1529
Putative transposase.
 
     0.668
Bpet1368
Probable signalling protein.
   
 
 0.640
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.614
Bpet2364
Two-component hyrid sensor and regulator.
  
 
 0.540
Bpet3444
Two-component hybrid sensor and regulator.
  
 
 0.450
Bpet2380
ABC transporter, ATP-binding protein.
  
 
 0.441
bvgS2
Virulence sensor protein.
  
 
 0.434
Bpet1531
Conserved hypothetical protein; Putative threonine efflux protein.
       0.430
Bpet1532
Conserved hypothetical protein; Putative threonine efflux protein.
       0.407
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.