Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bpet1571 | Bpet1572 | Bpet1571 | Bpet1572 | Putative mebrane transport protein. | Uncharacterized protein conserved in bacteria. | 0.795 |
Bpet1571 | ftsK | Bpet1571 | Bpet1574 | Putative mebrane transport protein. | Putative cell division protein. | 0.578 |
Bpet1571 | lolA | Bpet1571 | Bpet1575 | Putative mebrane transport protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.578 |
Bpet1571 | trxB1 | Bpet1571 | Bpet1573 | Putative mebrane transport protein. | Thioredoxin reductase. | 0.794 |
Bpet1572 | Bpet1571 | Bpet1572 | Bpet1571 | Uncharacterized protein conserved in bacteria. | Putative mebrane transport protein. | 0.795 |
Bpet1572 | ftsK | Bpet1572 | Bpet1574 | Uncharacterized protein conserved in bacteria. | Putative cell division protein. | 0.625 |
Bpet1572 | lolA | Bpet1572 | Bpet1575 | Uncharacterized protein conserved in bacteria. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.789 |
Bpet1572 | rplF | Bpet1572 | Bpet4935 | Uncharacterized protein conserved in bacteria. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.633 |
Bpet1572 | trxB1 | Bpet1572 | Bpet1573 | Uncharacterized protein conserved in bacteria. | Thioredoxin reductase. | 0.864 |
Bpet2918 | trxB1 | Bpet2918 | Bpet1573 | Conserved hypothetical protein. | Thioredoxin reductase. | 0.686 |
ahpC | trxA | Bpet1698 | Bpet1971 | Alkyl hydroperoxide reductase. | Thioredoxin. | 0.460 |
ahpC | trxB1 | Bpet1698 | Bpet1573 | Alkyl hydroperoxide reductase. | Thioredoxin reductase. | 0.834 |
ahpC | trxC | Bpet1698 | Bpet2554 | Alkyl hydroperoxide reductase. | Thioredoxin; Belongs to the thioredoxin family. | 0.408 |
ftsK | Bpet1571 | Bpet1574 | Bpet1571 | Putative cell division protein. | Putative mebrane transport protein. | 0.578 |
ftsK | Bpet1572 | Bpet1574 | Bpet1572 | Putative cell division protein. | Uncharacterized protein conserved in bacteria. | 0.625 |
ftsK | lolA | Bpet1574 | Bpet1575 | Putative cell division protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.899 |
ftsK | trxB1 | Bpet1574 | Bpet1573 | Putative cell division protein. | Thioredoxin reductase. | 0.735 |
lolA | Bpet1571 | Bpet1575 | Bpet1571 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative mebrane transport protein. | 0.578 |
lolA | Bpet1572 | Bpet1575 | Bpet1572 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Uncharacterized protein conserved in bacteria. | 0.789 |
lolA | ftsK | Bpet1575 | Bpet1574 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative cell division protein. | 0.899 |
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