Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bug39Putative secreted protein. (321 aa)    
Predicted Functional Partners:
Bpet0305
Putative membrane protein.
 
  
 0.822
Bpet0670
Putative membrane protein.
 
  
 0.822
Bpet4353
Uncharacterized protein conserved in bacteria.
 
  
 0.777
Bpet0754
Uncharacterized protein conserved in bacteria.
 
  
 0.771
Bpet1664
Transcriptional regulator, GntR family.
       0.719
Bpet4980
Putative membrane protein.
 
  
 0.705
leuC1
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the aconitase/IPM isomerase family.
       0.700
Bpet1667
Putative Phosphorylmutase.
       0.700
Bpet1666
Aconitase_C domain-containing protein; Unnamed protein product; Belongs to the LeuD family.
       0.690
Bpet0671
Hypothetical 16.3 kDa protein in TAR-I ttuC' 3'region.
 
  
 0.591
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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