Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bpet0293 | Bpet1781 | Bpet0293 | Bpet1781 | Urea amidolyase subunit 2. | Putative integral membrane protein. | 0.418 |
Bpet1780 | Bpet1781 | Bpet1780 | Bpet1781 | Conserved hypothetical protein; Uncharacterized protein possibly involved in utilization of glycolate and propanediol. | Putative integral membrane protein. | 0.661 |
Bpet1780 | acsA | Bpet1780 | Bpet1782 | Conserved hypothetical protein; Uncharacterized protein possibly involved in utilization of glycolate and propanediol. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.408 |
Bpet1780 | prpE | Bpet1780 | Bpet1779 | Conserved hypothetical protein; Uncharacterized protein possibly involved in utilization of glycolate and propanediol. | Putative propionyl-CoA synthetase. | 0.790 |
Bpet1781 | Bpet0293 | Bpet1781 | Bpet0293 | Putative integral membrane protein. | Urea amidolyase subunit 2. | 0.418 |
Bpet1781 | Bpet1780 | Bpet1781 | Bpet1780 | Putative integral membrane protein. | Conserved hypothetical protein; Uncharacterized protein possibly involved in utilization of glycolate and propanediol. | 0.661 |
Bpet1781 | acsA | Bpet1781 | Bpet1782 | Putative integral membrane protein. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.480 |
Bpet1781 | prpE | Bpet1781 | Bpet1779 | Putative integral membrane protein. | Putative propionyl-CoA synthetase. | 0.605 |
acsA | Bpet1780 | Bpet1782 | Bpet1780 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Conserved hypothetical protein; Uncharacterized protein possibly involved in utilization of glycolate and propanediol. | 0.408 |
acsA | Bpet1781 | Bpet1782 | Bpet1781 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Putative integral membrane protein. | 0.480 |
acsA | prpE | Bpet1782 | Bpet1779 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Putative propionyl-CoA synthetase. | 0.941 |
prpE | Bpet1780 | Bpet1779 | Bpet1780 | Putative propionyl-CoA synthetase. | Conserved hypothetical protein; Uncharacterized protein possibly involved in utilization of glycolate and propanediol. | 0.790 |
prpE | Bpet1781 | Bpet1779 | Bpet1781 | Putative propionyl-CoA synthetase. | Putative integral membrane protein. | 0.605 |
prpE | acsA | Bpet1779 | Bpet1782 | Putative propionyl-CoA synthetase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.941 |