Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bpet1368 | Bpet2364 | Bpet1368 | Bpet2364 | Probable signalling protein. | Two-component hyrid sensor and regulator. | 0.992 |
Bpet1368 | Bpet3444 | Bpet1368 | Bpet3444 | Probable signalling protein. | Two-component hybrid sensor and regulator. | 0.997 |
Bpet1368 | Bpet3930 | Bpet1368 | Bpet3930 | Probable signalling protein. | Serine/threonine kinase with two-component sensor domain. | 0.981 |
Bpet1368 | fixL | Bpet1368 | Bpet3020 | Probable signalling protein. | Two-component sensor kinase. | 0.945 |
Bpet1368 | gltB,asb | Bpet1368 | Bpet0153 | Probable signalling protein. | Glutamate synthase, large subunit. | 0.612 |
Bpet1368 | norR | Bpet1368 | Bpet2264 | Probable signalling protein. | Nitric oxide reductase transcription regulator. | 0.697 |
Bpet1368 | rpoN1 | Bpet1368 | Bpet0085 | Probable signalling protein. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.453 |
Bpet1368 | rpoN3 | Bpet1368 | Bpet2350 | Probable signalling protein. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.453 |
Bpet2265 | Bpet2266 | Bpet2265 | Bpet2266 | Conserved hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Hypothetical protein predicted by Glimmer/Critica. | 0.752 |
Bpet2265 | norR | Bpet2265 | Bpet2264 | Conserved hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Nitric oxide reductase transcription regulator. | 0.653 |
Bpet2266 | Bpet2265 | Bpet2266 | Bpet2265 | Hypothetical protein predicted by Glimmer/Critica. | Conserved hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.752 |
Bpet2266 | norR | Bpet2266 | Bpet2264 | Hypothetical protein predicted by Glimmer/Critica. | Nitric oxide reductase transcription regulator. | 0.592 |
Bpet2364 | Bpet1368 | Bpet2364 | Bpet1368 | Two-component hyrid sensor and regulator. | Probable signalling protein. | 0.992 |
Bpet2364 | Bpet3444 | Bpet2364 | Bpet3444 | Two-component hyrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.990 |
Bpet2364 | Bpet3930 | Bpet2364 | Bpet3930 | Two-component hyrid sensor and regulator. | Serine/threonine kinase with two-component sensor domain. | 0.994 |
Bpet2364 | fixL | Bpet2364 | Bpet3020 | Two-component hyrid sensor and regulator. | Two-component sensor kinase. | 0.985 |
Bpet2364 | gltB,asb | Bpet2364 | Bpet0153 | Two-component hyrid sensor and regulator. | Glutamate synthase, large subunit. | 0.477 |
Bpet2364 | norR | Bpet2364 | Bpet2264 | Two-component hyrid sensor and regulator. | Nitric oxide reductase transcription regulator. | 0.588 |
Bpet3444 | Bpet1368 | Bpet3444 | Bpet1368 | Two-component hybrid sensor and regulator. | Probable signalling protein. | 0.997 |
Bpet3444 | Bpet2364 | Bpet3444 | Bpet2364 | Two-component hybrid sensor and regulator. | Two-component hyrid sensor and regulator. | 0.990 |
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