STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bug46Putative secreted protein. (323 aa)    
Predicted Functional Partners:
Bpet0305
Putative membrane protein.
  
 0.828
Bpet0670
Putative membrane protein.
  
 0.828
Bpet4353
Uncharacterized protein conserved in bacteria.
  
 0.814
Bpet0754
Uncharacterized protein conserved in bacteria.
  
 0.809
Bpet4980
Putative membrane protein.
  
 0.796
Bpet2326
Putative aspartate racemase.
       0.728
Bpet2327
Putative N-acyl-D-amino-acid deacylase.
       0.723
Bpet2329
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
       0.552
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.