STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet2608HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (292 aa)    
Predicted Functional Partners:
Bpet2606
Putative membrane protein.
 
  
 0.958
slyA
Putative MarR-family transcriptional regulator.
 
  
 0.927
Bpet2607
Conserved hypothetical protein.
 
   
 0.920
Bpet2609
Outer membrane efflux protein.
 
 
 0.918
Bpet2952
Putative ABC-transporter membrane-spanning ATP-binding component.
  
 
 0.728
Bpet1110
Putative membrane protein.
 
  
 0.704
Bpet3583
Probable MFS transporter.
 
 
 0.666
Bpet1202
Outer membrane efflux protein.
 
 
 0.625
Bpet3582
Probable outer membrane efflux protein.
 
 
 0.612
Bpet2594
Outer membrane exporter protein.
 
 
 0.607
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.