Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bpet3003Uncharacterized conserved protein, contains double-stranded beta-helix domain. (139 aa)    
Predicted Functional Partners:
Bpet3005
Hypothetical protein predicted by Glimmer/Critica.
 
     0.849
Bpet3004
Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.835
Bpet3002
Transcriptional regulator, GntR-family.
 
     0.637
Bpet4136
Hypothetical protein.
 
     0.525
Bpet2931
Uncharacterized protein conserved in bacteria.
  
     0.495
Bpet3265
Conserved hypothetical protein; Predicted esterase of the alpha-beta hydrolase superfamily.
  
    0.479
Bpet3144
Conserved hypothetical protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
  
 0.435
Bpet1877
Unnamed protein product.
  
     0.420
Bpet3922
Aldolase domain protein, Class II.
 
   
 0.404
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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