STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet3005Hypothetical protein predicted by Glimmer/Critica. (219 aa)    
Predicted Functional Partners:
Bpet3003
Uncharacterized conserved protein, contains double-stranded beta-helix domain.
 
     0.850
Bpet3004
Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.741
Bpet3009
Probable tautomerase.
  
     0.585
Bpet4134
Transcriptional regulator, AraC-family.
 
     0.526
Bpet4690
Conserved hypothetical protein; Predicted O-methyltransferase.
 
     0.525
Bpet2200
Probable tautomerase.
  
     0.521
Bpet4011
Probable haloacid dehalogenase.
 
     0.519
Bpet3002
Transcriptional regulator, GntR-family.
       0.502
Bpet3859
Nectarin 1 precursor.
 
     0.482
Bpet3191
Transcriptional regulator, AraC-family.
 
     0.473
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.