STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggt4Ggt4 protein; Gamma-glutamyltranspeptidase. (528 aa)    
Predicted Functional Partners:
oplAH
5-oxoprolinase.
 
  
 0.926
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
 0.912
gpo
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.910
Bpet4705
Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
 0.910
pepA
Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.909
pepN
PepN protein; Aminopeptidase N.
    
 0.906
Bpet1517
Probable glutathione reductase.
     
 0.905
Bpet2539
Putative glutaredoxin.
    
 0.905
Bpet2923
Probable glutathione reductase.
     
 0.905
Bpet3724
Probable glutathione reductase.
     
 0.905
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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