STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet4039Conserved hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family. (503 aa)    
Predicted Functional Partners:
Bpet4040
Putative extracellular solute-binding protein.
 
     0.882
Bpet0807
Probable ABC transporter, periplasmic binding protein.
 
     0.717
Bpet0282
Probable ABC transporter, periplasmic binding protein.
 
     0.710
Bpet2889
Putative exodeoxyribonuclease III.
   
    0.641
Bpet4042
Probable ABC transporter, permease protein.
 
     0.600
Bpet4041
Putative ABC transporter permease protein.
 
     0.586
Bpet4043
Probable ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
       0.532
mmsA2
Methylmalonate-semialdehyde dehydrogenase.
       0.526
Bpet4044
Conserved hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
    
0.519
Bpet4037
Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.518
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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