STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet4275Hypothetical protein; ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components. (575 aa)    
Predicted Functional Partners:
Bpet4276
Hypothetical protein.
     0.950
Bpet4274
Putative membrane protein.
 
     0.948
Bpet4277
Conserved exported protein.
 
     0.948
Bpet4279
Conserved protein, putatively exported.
 
     0.948
Bpet4278
Conserved exported protein.
 
   
 0.944
Bpet4281
Putative lipoprotein.
 
     0.941
Bpet4265
Conserved hypothetical protein.
 
  
 0.888
Bpet4269
Conserved hypothetical protein.
 
     0.881
Bpet4267
Putative exported protein.
 
     0.880
Bpet4268
Putative secreted protein.
 
     0.879
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.