STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpet4381Putative thioesterase. (147 aa)    
Predicted Functional Partners:
Bpet4376
Putative acyl carrier protein.
 
 
 0.972
wcbR
Putative polyketide synthase.
  
 
 0.964
Bpet4375
Putative acyl carrier protein.
 
 
 0.964
Bpet4378
Conserved hypothetical protein; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
  
 0.959
Bpet4382
Putative secreted protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.954
Bpet4380
Putative membrane protein.
 
    0.953
Bpet4377
Unnamed protein product.
 
     0.952
Bpet4379
Glycosyltransferase.
 
    0.951
Bpet4374
Putative acyltransferase.
 
   
 0.946
Bpet4373
Conserved hypothetical protein.
 
   
 0.941
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.