Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bpet4658 | Bpet4660 | Bpet4658 | Bpet4660 | Putative exported protein. | Putative lipoprotein. | 0.770 |
Bpet4658 | Bpet4663 | Bpet4658 | Bpet4663 | Putative exported protein. | Putative secreted protein. | 0.733 |
Bpet4658 | Bpet4665 | Bpet4658 | Bpet4665 | Putative exported protein. | Iron-sulfur cluster-binding protein. | 0.545 |
Bpet4658 | Bpet4666 | Bpet4658 | Bpet4666 | Putative exported protein. | Conserved hypothetical protein. | 0.540 |
Bpet4658 | fdhA | Bpet4658 | Bpet4662 | Putative exported protein. | Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.740 |
Bpet4658 | fdhB | Bpet4658 | Bpet4661 | Putative exported protein. | Formate dehydrogenase, iron-sulfur subunit. | 0.744 |
Bpet4658 | fdhC | Bpet4658 | Bpet4659 | Putative exported protein. | Formate dehydrogenase subunit C precursor. | 0.775 |
Bpet4658 | fdhD | Bpet4658 | Bpet4657 | Putative exported protein. | Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.785 |
Bpet4658 | torD | Bpet4658 | Bpet4664 | Putative exported protein. | Chaperone protein torD. | 0.569 |
Bpet4660 | Bpet4658 | Bpet4660 | Bpet4658 | Putative lipoprotein. | Putative exported protein. | 0.770 |
Bpet4660 | Bpet4663 | Bpet4660 | Bpet4663 | Putative lipoprotein. | Putative secreted protein. | 0.789 |
Bpet4660 | Bpet4665 | Bpet4660 | Bpet4665 | Putative lipoprotein. | Iron-sulfur cluster-binding protein. | 0.595 |
Bpet4660 | Bpet4666 | Bpet4660 | Bpet4666 | Putative lipoprotein. | Conserved hypothetical protein. | 0.563 |
Bpet4660 | fdhA | Bpet4660 | Bpet4662 | Putative lipoprotein. | Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.788 |
Bpet4660 | fdhB | Bpet4660 | Bpet4661 | Putative lipoprotein. | Formate dehydrogenase, iron-sulfur subunit. | 0.800 |
Bpet4660 | fdhC | Bpet4660 | Bpet4659 | Putative lipoprotein. | Formate dehydrogenase subunit C precursor. | 0.868 |
Bpet4660 | fdhD | Bpet4660 | Bpet4657 | Putative lipoprotein. | Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.728 |
Bpet4660 | napA | Bpet4660 | Bpet4079 | Putative lipoprotein. | Periplasmic nitrate reductase precursor NapA; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.651 |
Bpet4660 | torD | Bpet4660 | Bpet4664 | Putative lipoprotein. | Chaperone protein torD. | 0.617 |
Bpet4663 | Bpet4658 | Bpet4663 | Bpet4658 | Putative secreted protein. | Putative exported protein. | 0.733 |
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