Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bpet4792Putative transport protein ATP-binding. (242 aa)    
Predicted Functional Partners:
Bpet4791
Putative ABC transporter permease protein.
 
 
 0.999
Bpet4790
Putative periplasmic solute-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.995
Bpet4793
Putative regulatory protein; Belongs to the Fur family.
  
  
 0.755
Bpet4788
Putative membrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
   
 0.747
Bpet4789
Conserved hypothetical protein; ABC-type uncharacterized transport system periplasmic component.
 
   
 0.734
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.573
Bpet4787
TonB-dependent outer membrane receptor.
  
  
 0.533
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.482
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.473
Bpet1854
Putative membrane protein.
 
  
 0.436
Your Current Organism:
Bordetella petrii
NCBI taxonomy Id: 94624
Other names: B. petrii, Bordetella petrii von Wintzingerode et al. 2001, CCUG 43448, DSM 12804, strain Se-1111R
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