STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTSG_03344Orotidine 5'-monophosphate decarboxylase. (475 aa)    
Predicted Functional Partners:
PTSG_08755
Dihydroorotate dehydrogenase.
  
 0.999
PTSG_11170
Vesicle transporter GOT1B.
  
 
 0.995
PTSG_10135
Amidohydro_3 domain-containing protein.
  
  
 0.988
PTSG_09057
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 
 0.958
PTSG_02927
Cytidylate kinase; Belongs to the adenylate kinase family.
   
 0.957
PTSG_09838
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
   
 0.957
PTSG_09240
PRK domain-containing protein.
   
 0.936
PTSG_00700
Uncharacterized protein.
   
 0.929
PTSG_05423
Uracil phosphoribosyltransferase.
   
 0.929
PTSG_06600
Uridine kinase; Belongs to the uridine kinase family.
   
 0.929
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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