STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTSG_10360Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
PTSG_02882
Uncharacterized protein.
   
 0.598
PTSG_05241
Uncharacterized protein.
   
 0.598
PTSG_03320
Uncharacterized protein.
    
 0.567
PTSG_03069
Uncharacterized protein.
    
 0.564
PTSG_08345
SCA7 domain-containing protein.
    
 0.564
PTSG_03455
Uncharacterized protein.
    
 0.555
PTSG_00325
TAF domain-containing protein.
    
 0.554
PTSG_10955
HDAC_interact domain-containing protein.
   
 0.548
PTSG_11425
SANT domain-containing protein.
    
 0.545
PTSG_09511
Uncharacterized protein.
    
 0.544
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.