STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_028030OTU family cysteine protease. (468 aa)    
Predicted Functional Partners:
BESB_021670
PUL domain-containing protein.
    
 
 0.996
BESB_047570
UBX domain-containing protein.
   
 
 0.996
BESB_037640
NPL4 family protein.
    
 
 0.994
BESB_057040
U-box domain-containing protein.
    
 
 0.990
BESB_006850
Ribosomal-ubiquitin protein RPS27A.
   
 
 0.980
BESB_024220
Cell division protein CDC48AP.
   
 0.945
BESB_037270
ATPase, AAA family protein.
   
 0.945
BESB_038290
Cell division protein CDC48CY.
   
 0.945
BESB_020310
Ribosomal-ubiquitin protein RPL40.
    
   0.923
BESB_053560
Ubiquitin fusion degradation protein UFD1CY.
   
 
 0.900
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.