STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_017630Acetyltransferase, GNAT family protein. (570 aa)    
Predicted Functional Partners:
BESB_030090
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.895
BESB_041030
LSM domain-containing protein.
    
 0.868
BESB_004890
Aspartate aminotransferase.
   
 
 0.603
BESB_077580
Zinc finger (CCCH type) motif-containing protein.
     
 0.598
BESB_013420
Putative asparagine synthetase.
     
 0.584
BESB_047100
Uncharacterized protein.
   
 
 0.577
BESB_060720
Peptidase, M28 family protein.
    
  0.570
BESB_019220
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
  0.526
BESB_034730
Carbamoylphosphate synthetase.
   
 
  0.526
BESB_053750
Asparagine synthetase domain-containing protein.
     
 0.522
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.