STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_082240Uncharacterized protein. (2607 aa)    
Predicted Functional Partners:
BESB_085490
Ccr4-associated factor family protein.
    
 0.999
BESB_002600
Uncharacterized protein.
    
 0.999
BESB_019390
Uncharacterized protein.
    
 0.996
BESB_074020
DEAD (Asp-Glu-Ala-Asp) box polypeptide DDX6; Belongs to the DEAD box helicase family.
    
 0.995
BESB_077290
NOT2 / NOT3 / NOT5 family protein.
    
 0.994
BESB_012260
CMGC kinase.
    
 
 0.984
BESB_066430
3' exoribonuclease family, domain 1 domain-containing protein.
    
   0.983
BESB_008690
Not1 N-terminal domain, CCR4-Not complex component protein.
   
 0.973
BESB_054440
Not3 domain-containing protein.
   
 0.960
BESB_015760
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.930
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.