STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_042450Rhoptry protein ROP18. (579 aa)    
Predicted Functional Partners:
BESB_022750
Inhibitor of growth protein.
    
 0.960
BESB_043810
CDK-activating kinase assembly factor MAT1 protein.
   
 0.954
BESB_085480
Cyclin domain protein, cyclin H family protein.
    
 0.953
BESB_077730
DNA excision repair helicase.
    
 0.952
BESB_049780
General transcription factor IIH polypeptide 3 GTF2H3.
    
 0.951
BESB_026280
General transcription factor IIH polypeptide 2 GTF2H2.
   
 0.943
BESB_010260
General transcription factor IIE polypeptide 1 GTF2E1.
    
 0.942
BESB_006430
BSD domain-containing protein.
   
 0.942
BESB_053030
TFIIH basal transcription factor complex helicase XPB subunit.
    
 0.931
BESB_035510
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.905
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.