STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_084240DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)    
Predicted Functional Partners:
BESB_068140
Paf1/RNA polymerase II complex component LEO1.
    
 0.999
BESB_022750
Inhibitor of growth protein.
   
  0.971
BESB_081480
DNA-directed RNA polymerase II RPB3.
  
 0.941
BESB_053770
DNA-directed RNA polymerase II RPB6.
  
 0.940
BESB_045330
DNA-directed RNA polymerase II RPB5.
  
 0.938
BESB_018250
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.931
BESB_015390
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.914
BESB_008710
Transcription elongation factor SPT5.
   
 0.912
BESB_012810
DNA-directed RNA polymerase II RPABC4.
   
 0.907
BESB_038790
DNA-directed RNA polymerase II RPB10.
   
 0.901
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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