Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BESB_008710 | BESB_012810 | A0A2A9MKQ1 | A0A2A9M3Z3 | Transcription elongation factor SPT5. | DNA-directed RNA polymerase II RPABC4. | 0.999 |
BESB_008710 | BESB_015390 | A0A2A9MKQ1 | A0A2A9MAG0 | Transcription elongation factor SPT5. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.703 |
BESB_008710 | BESB_018250 | A0A2A9MKQ1 | A0A2A9MA69 | Transcription elongation factor SPT5. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.510 |
BESB_008710 | BESB_038790 | A0A2A9MKQ1 | A0A2A9MM18 | Transcription elongation factor SPT5. | DNA-directed RNA polymerase II RPB10. | 0.995 |
BESB_008710 | BESB_045330 | A0A2A9MKQ1 | A0A2A9MJC0 | Transcription elongation factor SPT5. | DNA-directed RNA polymerase II RPB5. | 0.999 |
BESB_008710 | BESB_053770 | A0A2A9MKQ1 | A0A2A9MID8 | Transcription elongation factor SPT5. | DNA-directed RNA polymerase II RPB6. | 0.999 |
BESB_008710 | BESB_068140 | A0A2A9MKQ1 | A0A2A9MEU0 | Transcription elongation factor SPT5. | Paf1/RNA polymerase II complex component LEO1. | 0.999 |
BESB_008710 | BESB_081480 | A0A2A9MKQ1 | A0A2A9M4S3 | Transcription elongation factor SPT5. | DNA-directed RNA polymerase II RPB3. | 0.999 |
BESB_008710 | BESB_084240 | A0A2A9MKQ1 | A0A2A9M5I9 | Transcription elongation factor SPT5. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.912 |
BESB_012810 | BESB_008710 | A0A2A9M3Z3 | A0A2A9MKQ1 | DNA-directed RNA polymerase II RPABC4. | Transcription elongation factor SPT5. | 0.999 |
BESB_012810 | BESB_015390 | A0A2A9M3Z3 | A0A2A9MAG0 | DNA-directed RNA polymerase II RPABC4. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
BESB_012810 | BESB_018250 | A0A2A9M3Z3 | A0A2A9MA69 | DNA-directed RNA polymerase II RPABC4. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
BESB_012810 | BESB_022750 | A0A2A9M3Z3 | A0A2A9M7Y7 | DNA-directed RNA polymerase II RPABC4. | Inhibitor of growth protein. | 0.976 |
BESB_012810 | BESB_038790 | A0A2A9M3Z3 | A0A2A9MM18 | DNA-directed RNA polymerase II RPABC4. | DNA-directed RNA polymerase II RPB10. | 0.999 |
BESB_012810 | BESB_045330 | A0A2A9M3Z3 | A0A2A9MJC0 | DNA-directed RNA polymerase II RPABC4. | DNA-directed RNA polymerase II RPB5. | 0.999 |
BESB_012810 | BESB_053770 | A0A2A9M3Z3 | A0A2A9MID8 | DNA-directed RNA polymerase II RPABC4. | DNA-directed RNA polymerase II RPB6. | 0.999 |
BESB_012810 | BESB_068140 | A0A2A9M3Z3 | A0A2A9MEU0 | DNA-directed RNA polymerase II RPABC4. | Paf1/RNA polymerase II complex component LEO1. | 0.999 |
BESB_012810 | BESB_081480 | A0A2A9M3Z3 | A0A2A9M4S3 | DNA-directed RNA polymerase II RPABC4. | DNA-directed RNA polymerase II RPB3. | 0.999 |
BESB_012810 | BESB_084240 | A0A2A9M3Z3 | A0A2A9M5I9 | DNA-directed RNA polymerase II RPABC4. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.907 |
BESB_015390 | BESB_008710 | A0A2A9MAG0 | A0A2A9MKQ1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT5. | 0.703 |
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