STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_024380SWI2/SNF2 ISWI-like SANT. (1206 aa)    
Predicted Functional Partners:
BESB_082110
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.824
BESB_040950
Histone H2A; Belongs to the histone H2A family.
   
 0.803
BESB_053770
DNA-directed RNA polymerase II RPB6.
    
 0.774
BESB_044440
EF-hand domain-containing protein.
    
  0.772
BESB_027820
WD domain, G-beta repeat-containing protein.
   
 0.763
BESB_048160
RbAp48.
   
 0.763
BESB_005920
RbAp46.
   
 0.763
BESB_012350
Histone lysine acetyltransferase GCN5-A.
    
 0.760
BESB_046640
Histone lysine acetyltransferase GCN5-B.
    
 0.760
BESB_084840
Histone H3; Belongs to the histone H3 family.
   
 0.755
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.