STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_022390Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
BESB_030090
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.837
BESB_055200
Ribosomal protein RPS19.
  
    0.819
BESB_059630
Ribosomal protein RPS11; Belongs to the universal ribosomal protein uS17 family.
   
    0.808
BESB_046030
Ribosomal protein RPS5; Belongs to the universal ribosomal protein uS7 family.
   
    0.801
BESB_023540
Ribosomal protein RPS28.
  
    0.795
BESB_009290
Ribosomal protein RPL30.
   
    0.791
BESB_029270
Ribosomal protein RPL35.
   
    0.785
BESB_009220
Ribosomal protein RPS3.
   
    0.778
BESB_059230
Ribosomal protein RPL34.
   
    0.777
BESB_022260
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
    0.766
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.