STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_073670tRNA dimethylallyltransferase; Belongs to the IPP transferase family. (699 aa)    
Predicted Functional Partners:
BESB_059320
4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
     
 0.866
BESB_052640
Polyprenyl synthetase superfamily protein.
  
 
 0.865
BESB_078830
Cytochrome p450 superfamily protein; Belongs to the cytochrome P450 family.
     
 0.864
BESB_062130
Polyprenyl synthetase superfamily protein.
  
 
 0.856
BESB_076810
Hflx-type G domain-containing protein.
  
  
 0.852
BESB_011690
RNA pseudouridine synthase superfamily protein.
  
  
 0.776
BESB_003990
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
  
 0.766
BESB_000460
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
  
  
 0.764
BESB_038420
Radical SAM methylthiotransferase, MiaB/RimO family protein.
  
  
 0.729
BESB_054590
SAM_MT_TRM5_TYW2 domain-containing protein.
   
  
 0.723
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.