STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_059450RIO1 family protein. (494 aa)    
Predicted Functional Partners:
BESB_033190
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
BESB_032500
Uncharacterized protein.
   
 0.999
BESB_081530
Bystin protein.
   
 0.999
BESB_017700
Ribosomal protein RPS2; Belongs to the universal ribosomal protein uS5 family.
    
 0.999
BESB_048410
Putative ribosome biogenesis protein.
   
 0.999
BESB_053520
Ribosomal protein RPS13; Belongs to the universal ribosomal protein uS15 family.
    
 0.999
BESB_039430
Nin one binding (NOB1) Zn-ribbon family protein; Belongs to the NOB1 family.
   
 0.999
BESB_062800
Ribosomal protein RPS20.
   
 0.999
BESB_047580
Putative pre-rRNA-processing protein PNO1.
   
 0.999
BESB_002850
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
    
  0.999
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.