STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_018600RNA recognition motif-containing protein. (188 aa)    
Predicted Functional Partners:
BESB_016290
RNA recognition motif-containing protein.
  
 0.822
BESB_020470
Nuclear cap-binding protein subunit 2.
  
 
 0.820
BESB_004020
MIF4G_like_2 domain-containing protein.
    
 0.780
BESB_062070
RNA recognition motif-containing protein.
  
 0.776
BESB_030090
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.763
BESB_023810
Small nuclear ribonucleoprotein.
   
 0.756
BESB_051490
RNA recognition motif-containing protein.
  
 0.756
BESB_071220
RNA recognition motif-containing protein.
   
 0.756
BESB_050380
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.753
BESB_046890
Zinc finger (CCCH type) motif-containing protein.
   
 0.749
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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