STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_014860Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
BESB_053570
Trm112p family domain-containing protein.
    
 0.963
BESB_022350
Peptidyl-tRNA hydrolase domain-containing protein.
  
 
 0.865
BESB_075110
Peptidyl-tRNA hydrolase domain-containing protein.
  
 
 0.865
BESB_056370
Peptidyl-tRNA hydrolase domain-containing protein.
  
 
 0.865
BESB_056750
Putative eukaryotic peptide chain release factor.
    
 0.812
BESB_062760
Coproporphyrinogen III oxidase.
   
 
 0.741
BESB_045400
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
    
 0.735
BESB_084540
Putative protoheme ferro-lyase; Belongs to the ferrochelatase family.
    
 0.720
BESB_054850
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.700
BESB_068250
ATP synthase F1, delta subunit protein.
  
   0.686
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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