STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_083350Cof family hydrolase subfamily protein. (333 aa)    
Predicted Functional Partners:
BESB_075250
Rhodanese family domain-containing protein.
   
   0.825
BESB_037450
KH domain-containing protein.
    
   0.819
BESB_059630
Ribosomal protein RPS11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.796
BESB_082530
Putative 50S ribosomal protein l24.
  
 
 0.699
BESB_061230
Putative 50S ribosomal protein L13.
  
 
 0.698
BESB_067440
GTPase.
  
  
 0.675
BESB_051690
Uncharacterized protein.
    
 
 0.672
BESB_078540
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.670
BESB_078400
Superoxide dismutase SOD2.
   
 
 0.670
BESB_078420
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.670
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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