BESB_064650 protein (Besnoitia besnoiti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BESB_064650

Helicase ATP-binding domain-containing protein. (1519 aa)

Predicted Functional Partners:

BESB_051450

0.877

BESB_067830

0.868

BESB_055270

0.800

BESB_033580

0.797

BESB_082610

0.758

BESB_032900

0.749

BESB_068250

0.743

BESB_002100

0.739

BESB_051620

0.733

BESB_009640

0.730

Your Current Organism:

Besnoitia besnoiti

NCBI taxonomy Id: 94643
Other names: B. besnoiti

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BESB_002100	BESB_009640	A0A2A9MIX5	A0A2A9MQZ6	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F1 gamma subunit.	0.999
BESB_002100	BESB_032900	A0A2A9MIX5	A0A2A9M615	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Sde2_N_Ubi domain-containing protein.	0.449
BESB_002100	BESB_064650	A0A2A9MIX5	A0A2A9MB55	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Helicase ATP-binding domain-containing protein.	0.739
BESB_002100	BESB_067830	A0A2A9MIX5	A0A2A9MH52	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Elongation factor 2 family protein.	0.619
BESB_002100	BESB_068250	A0A2A9MIX5	A0A2A9MHA9	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F1, delta subunit protein.	0.999
BESB_009640	BESB_002100	A0A2A9MQZ6	A0A2A9MIX5	ATP synthase F1 gamma subunit.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
BESB_009640	BESB_064650	A0A2A9MQZ6	A0A2A9MB55	ATP synthase F1 gamma subunit.	Helicase ATP-binding domain-containing protein.	0.730
BESB_009640	BESB_067830	A0A2A9MQZ6	A0A2A9MH52	ATP synthase F1 gamma subunit.	Elongation factor 2 family protein.	0.720
BESB_009640	BESB_068250	A0A2A9MQZ6	A0A2A9MHA9	ATP synthase F1 gamma subunit.	ATP synthase F1, delta subunit protein.	0.999
BESB_032900	BESB_002100	A0A2A9M615	A0A2A9MIX5	Sde2_N_Ubi domain-containing protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.449
BESB_032900	BESB_033580	A0A2A9M615	A0A2A9MMR9	Sde2_N_Ubi domain-containing protein.	Myb family DNA-binding domain-containing protein.	0.912
BESB_032900	BESB_064650	A0A2A9M615	A0A2A9MB55	Sde2_N_Ubi domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.749
BESB_032900	BESB_067830	A0A2A9M615	A0A2A9MH52	Sde2_N_Ubi domain-containing protein.	Elongation factor 2 family protein.	0.999
BESB_033580	BESB_032900	A0A2A9MMR9	A0A2A9M615	Myb family DNA-binding domain-containing protein.	Sde2_N_Ubi domain-containing protein.	0.912
BESB_033580	BESB_051450	A0A2A9MMR9	A0A2A9ME72	Myb family DNA-binding domain-containing protein.	Putative U5 snRNP-associated subunit.	0.603
BESB_033580	BESB_051620	A0A2A9MMR9	A0A2A9MGW6	Myb family DNA-binding domain-containing protein.	Putative U2 small nuclear ribonucleoprotein family protein.	0.999
BESB_033580	BESB_064650	A0A2A9MMR9	A0A2A9MB55	Myb family DNA-binding domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.797
BESB_033580	BESB_067830	A0A2A9MMR9	A0A2A9MH52	Myb family DNA-binding domain-containing protein.	Elongation factor 2 family protein.	0.999
BESB_051450	BESB_033580	A0A2A9ME72	A0A2A9MMR9	Putative U5 snRNP-associated subunit.	Myb family DNA-binding domain-containing protein.	0.603
BESB_051450	BESB_051620	A0A2A9ME72	A0A2A9MGW6	Putative U5 snRNP-associated subunit.	Putative U2 small nuclear ribonucleoprotein family protein.	0.999