STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_077580Zinc finger (CCCH type) motif-containing protein. (600 aa)    
Predicted Functional Partners:
BESB_022380
Putative suppressor of kinetochore protein 1; Belongs to the SKP1 family.
    
 0.999
BESB_066840
Ring box protein 1 family protein.
    
 0.990
BESB_020620
Cullin family protein; Belongs to the cullin family.
    
 0.958
BESB_013740
Putative cullin 3; Belongs to the cullin family.
    
 0.958
BESB_020310
Ribosomal-ubiquitin protein RPL40.
    
  0.914
BESB_086520
Ribosomal protein L2.
    
 0.910
BESB_012540
Putative LSU ribosomal protein L2P.
    
 0.910
BESB_001710
Leucine rich repeat-containing protein.
    
 0.871
BESB_019030
HECT domain-containing protein.
   
 0.865
BESB_066340
Ubiquitin-conjugating enzyme subfamily protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.838
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.