STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_084090Uncharacterized protein. (702 aa)    
Predicted Functional Partners:
BESB_030030
SRP72 RNA-binding domain-containing protein.
   
 0.999
BESB_074100
Signal recognition particle SRP54 protein.
    
 0.999
BESB_076410
Signal recognition particle 14kd protein.
    
 0.999
BESB_067370
SRP19 protein.
    
 0.999
BESB_036880
Signal recognition particle (SRP9) domain-containing protein.
   
 0.999
BESB_057170
Signal recognition particle receptor alpha subunit.
   
 0.969
BESB_047860
Signal recognition particle receptor beta subunit protein.
   
 
 0.941
BESB_059380
Ribosomal protein RPL3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.923
BESB_081300
Ribosomal protein RPL23A; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.908
BESB_001580
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.904
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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