STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_084610Putative Ubiquitin family protein. (73 aa)    
Predicted Functional Partners:
BESB_045120
SART-1 family protein.
    
 0.999
BESB_009540
Pre-mRNA processing splicing factor PRP8.
    
 
 0.999
BESB_035450
Micro-fibrillar-associated protein 1.
    
 0.970
BESB_048950
Putative pre-mRNA splicing factor.
    
 0.962
BESB_053270
Putative splicing factor DIM1.
   
  0.908
BESB_053700
WW domain binding protein 11.
    
  0.904
BESB_033700
U1-type domain-containing protein.
    
 0.903
BESB_033580
Myb family DNA-binding domain-containing protein.
    
 0.884
BESB_051450
Putative U5 snRNP-associated subunit.
    
 0.871
BESB_048690
G-protein beta WD-40 repeat containing protein.
    
 0.868
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.