BESB_043960 protein (Besnoitia besnoiti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BESB_043960

Uncharacterized protein. (311 aa)

Predicted Functional Partners:

BESB_023920

0.999

BESB_077030

0.999

BESB_039520

0.998

BESB_065190

0.985

BESB_045450

0.985

BESB_044800

0.944

BESB_057600

0.942

BESB_053230

0.935

BESB_001930

0.930

BESB_046650

0.924

Your Current Organism:

Besnoitia besnoiti

NCBI taxonomy Id: 94643
Other names: B. besnoiti

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BESB_001930	BESB_043960	A0A2A9MMZ9	A0A2A9MGA7	IQ calmodulin-binding motif domain-containing protein.	Uncharacterized protein.	0.930
BESB_001930	BESB_057600	A0A2A9MMZ9	A0A2A9ME04	IQ calmodulin-binding motif domain-containing protein.	Rhoptry kinase family protein ROP20.	0.964
BESB_001930	BESB_077030	A0A2A9MMZ9	A0A2A9MC32	IQ calmodulin-binding motif domain-containing protein.	Synaptobrevin protein.	0.930
BESB_023920	BESB_039520	A0A2A9M936	A0A2A9MJX9	Syntaxin protein.	Putative SNAP protein (Soluble N-ethylmaleimide-sensitive factor Attachment Protein).	0.999
BESB_023920	BESB_043960	A0A2A9M936	A0A2A9MGA7	Syntaxin protein.	Uncharacterized protein.	0.999
BESB_023920	BESB_044800	A0A2A9M936	A0A2A9MCS0	Syntaxin protein.	Putative N-ethylmaleimide-sensitive fusion protein.	0.975
BESB_023920	BESB_045450	A0A2A9M936	A0A2A9MKZ5	Syntaxin protein.	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	0.999
BESB_023920	BESB_046650	A0A2A9M936	A0A2A9MLB1	Syntaxin protein.	Putative Ras-related protein Rab2BV.	0.714
BESB_023920	BESB_053230	A0A2A9M936	A0A2A9MJV2	Syntaxin protein.	Synaptobrevin family protein; Belongs to the synaptobrevin family.	0.982
BESB_023920	BESB_057600	A0A2A9M936	A0A2A9ME04	Syntaxin protein.	Rhoptry kinase family protein ROP20.	0.522
BESB_023920	BESB_065190	A0A2A9M936	A0A2A9MFW3	Syntaxin protein.	SNARE domain-containing protein.	0.948
BESB_023920	BESB_077030	A0A2A9M936	A0A2A9MC32	Syntaxin protein.	Synaptobrevin protein.	0.999
BESB_039520	BESB_023920	A0A2A9MJX9	A0A2A9M936	Putative SNAP protein (Soluble N-ethylmaleimide-sensitive factor Attachment Protein).	Syntaxin protein.	0.999
BESB_039520	BESB_043960	A0A2A9MJX9	A0A2A9MGA7	Putative SNAP protein (Soluble N-ethylmaleimide-sensitive factor Attachment Protein).	Uncharacterized protein.	0.998
BESB_039520	BESB_044800	A0A2A9MJX9	A0A2A9MCS0	Putative SNAP protein (Soluble N-ethylmaleimide-sensitive factor Attachment Protein).	Putative N-ethylmaleimide-sensitive fusion protein.	0.999
BESB_039520	BESB_045450	A0A2A9MJX9	A0A2A9MKZ5	Putative SNAP protein (Soluble N-ethylmaleimide-sensitive factor Attachment Protein).	Sec1 family protein; Belongs to the STXBP/unc-18/SEC1 family.	0.578
BESB_039520	BESB_053230	A0A2A9MJX9	A0A2A9MJV2	Putative SNAP protein (Soluble N-ethylmaleimide-sensitive factor Attachment Protein).	Synaptobrevin family protein; Belongs to the synaptobrevin family.	0.987
BESB_039520	BESB_065190	A0A2A9MJX9	A0A2A9MFW3	Putative SNAP protein (Soluble N-ethylmaleimide-sensitive factor Attachment Protein).	SNARE domain-containing protein.	0.995
BESB_039520	BESB_077030	A0A2A9MJX9	A0A2A9MC32	Putative SNAP protein (Soluble N-ethylmaleimide-sensitive factor Attachment Protein).	Synaptobrevin protein.	0.999
BESB_043960	BESB_001930	A0A2A9MGA7	A0A2A9MMZ9	Uncharacterized protein.	IQ calmodulin-binding motif domain-containing protein.	0.930