STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_036570Zinc finger, C3HC4 type (RING finger) domain-containing protein. (1132 aa)    
Predicted Functional Partners:
BESB_068130
Flavokinase domain-containing protein.
   
 
  0.761
BESB_056690
Ubiquitin-conjugating enzyme subfamily protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.522
BESB_044060
Ubiquitin-conjugating enzyme subfamily protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.522
BESB_056980
Putative ubiquitin conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.522
BESB_029200
3'-5' exonuclease domain-containing protein.
    
 
 0.509
BESB_018170
ATP-dependent DNA helicase, RecQ family protein.
    
 
 0.509
BESB_048180
ATP-dependent DNA helicase, RecQ family protein.
    
 
 0.509
BESB_023090
Ubiquitin-conjugating enzyme subfamily protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.460
BESB_017410
Histone arginine methyltransferase PRMT4/CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
  0.453
BESB_027610
Ubiquitin-conjugating enzyme subfamily protein.
    
 
 0.430
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.