BESB_058390 protein (Besnoitia besnoiti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BESB_058390

C2H2-type domain-containing protein. (2939 aa)

Predicted Functional Partners:

BESB_059560

0.825

BESB_052640

0.817

BESB_026650

0.803

BESB_050390

0.704

BESB_073680

0.639

BESB_078550

0.635

BESB_056420

0.635

BESB_082740

0.623

BESB_062130

0.620

BESB_017160

0.619

Your Current Organism:

Besnoitia besnoiti

NCBI taxonomy Id: 94643
Other names: B. besnoiti

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BESB_017160	BESB_026650	A0A2A9M1M7	A0A2A9M5V0	Methyltransf_11 domain-containing protein.	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).	0.704
BESB_017160	BESB_058390	A0A2A9M1M7	A0A2A9MHT0	Methyltransf_11 domain-containing protein.	C2H2-type domain-containing protein.	0.619
BESB_026650	BESB_017160	A0A2A9M5V0	A0A2A9M1M7	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).	Methyltransf_11 domain-containing protein.	0.704
BESB_026650	BESB_052640	A0A2A9M5V0	A0A2A9MIY8	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).	Polyprenyl synthetase superfamily protein.	0.742
BESB_026650	BESB_058390	A0A2A9M5V0	A0A2A9MHT0	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).	C2H2-type domain-containing protein.	0.803
BESB_026650	BESB_062130	A0A2A9M5V0	A0A2A9MH89	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).	Polyprenyl synthetase superfamily protein.	0.500
BESB_050390	BESB_058390	A0A2A9MM73	A0A2A9MHT0	Putative histone deacetylase.	C2H2-type domain-containing protein.	0.704
BESB_050390	BESB_059560	A0A2A9MM73	A0A2A9MB08	Putative histone deacetylase.	Histone deacetylase SIR2.	0.914
BESB_052640	BESB_026650	A0A2A9MIY8	A0A2A9M5V0	Polyprenyl synthetase superfamily protein.	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).	0.742
BESB_052640	BESB_058390	A0A2A9MIY8	A0A2A9MHT0	Polyprenyl synthetase superfamily protein.	C2H2-type domain-containing protein.	0.817
BESB_052640	BESB_062130	A0A2A9MIY8	A0A2A9MH89	Polyprenyl synthetase superfamily protein.	Polyprenyl synthetase superfamily protein.	0.921
BESB_056420	BESB_058390	A0A2A9MIA8	A0A2A9MHT0	Uncharacterized protein.	C2H2-type domain-containing protein.	0.635
BESB_056420	BESB_073680	A0A2A9MIA8	A0A2A9ME39	Uncharacterized protein.	Splicing factor, CC1 family protein.	0.663
BESB_056420	BESB_082740	A0A2A9MIA8	A0A2A9M534	Uncharacterized protein.	C2H2-type domain-containing protein.	0.668
BESB_058390	BESB_017160	A0A2A9MHT0	A0A2A9M1M7	C2H2-type domain-containing protein.	Methyltransf_11 domain-containing protein.	0.619
BESB_058390	BESB_026650	A0A2A9MHT0	A0A2A9M5V0	C2H2-type domain-containing protein.	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).	0.803
BESB_058390	BESB_050390	A0A2A9MHT0	A0A2A9MM73	C2H2-type domain-containing protein.	Putative histone deacetylase.	0.704
BESB_058390	BESB_052640	A0A2A9MHT0	A0A2A9MIY8	C2H2-type domain-containing protein.	Polyprenyl synthetase superfamily protein.	0.817
BESB_058390	BESB_056420	A0A2A9MHT0	A0A2A9MIA8	C2H2-type domain-containing protein.	Uncharacterized protein.	0.635
BESB_058390	BESB_059560	A0A2A9MHT0	A0A2A9MB08	C2H2-type domain-containing protein.	Histone deacetylase SIR2.	0.825