STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_056420Uncharacterized protein. (3928 aa)    
Predicted Functional Partners:
BESB_035450
Micro-fibrillar-associated protein 1.
   
 0.960
BESB_048950
Putative pre-mRNA splicing factor.
   
 0.950
BESB_033700
U1-type domain-containing protein.
    
  0.938
BESB_080300
DEAD/DEAH box helicase domain-containing protein.
   
 0.926
BESB_072640
PWI domain-containing protein.
   
 0.909
BESB_033580
Myb family DNA-binding domain-containing protein.
   
  0.893
BESB_008530
SKIP/SNW domain-containing protein.
   
 0.891
BESB_053720
Cwf15/Cwc15 cell cycle control protein.
   
  0.883
BESB_012250
Zinc finger protein.
   
 0.882
BESB_085690
Cwf18 pre-mRNA splicing factor protein.
    
  0.880
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.